Sentence examples for median alignment length from inspiring English sources

The edges shown in this figure represent a mean pairwise alignment score for all-by-all comparisons of these 4298 sequences that is better than an E-value cutoff of 1 × 10 80, with a median percent identity of 43% and a median alignment length of 377 residues.

Fraction of read aligned is defined as (alignment length + insertions - deletions)/ alignment length + unaligned length - deletions + insertions).

The average alignment length was 1,463 bp with a mean pairwise nucleotide distance, excluding indels, of 0.0175 ± 0.0101, and a median of 0.0158 (table 4).

The average alignment length was 552.8 nt.

The alignment coverage was defined as the alignment length divided by the length of the shorter sequence.

We keep only the partial alignments whose lengths are greater than the threshold (i.e., minimum partial alignment length).

The minimum partial alignment length is proportionally determined to the length of the target sequence.

: Alignment length of all sequences.

The final alignment length was 1,707 nt.

Total alignment length was 1043 nucleotides.

The alignment length percentage is calculated from the length of the subject protein and length of the alignment.