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Since a user rarely examines a retrieval list far beyond the E-value threshold E0, any practical measure of database retrieval in bioinformatics should reflect the user's E0.
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This raises a significant problem for mechanistic modeling, since in the absence of objective measures of database bias or reliability it is not clear which genes/proteins to include for modeling or experimental measurement.
The surface area under the database enrichment curve (q) is a measure of the database enrichment.
Because different database search methods report different confidence measures associated with the reported peptides, we have transformed the measure of each database search method to the proper E-value using a method reported earlier [ 37].
The authors found that the best independent measure of a database's performance is obtained by dividing the number of hits by the product of the total individuals in the database and the number of crime scene samples.
The q value given by eq. 5 is a measure of the database enrichment in addition to q α in eq 11.
The generated common pharmacophore hypothesis and 3D-QSAR models were validated further externally by measuring the activity of database compounds and assessing it with actual activity.
We compared five indirect measures of two databases of children's feet.
One of the mayor difficulties to achieve higher maturity levels in software development is the lack of adequacy of the collected measures and measurement database available in software organizations to apply statistical process control, and the difficulty to access project data (Kitchenham et al. 2006).
Use the National Provider Identification NPIDdatabasease to estimate number of duplicates as a measure of how well this database is being managed.
We lacked a measure of osteoporosis in our database, which is a risk factor for fractures in general and might be a risk factor for periprosthetic fracture.
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