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Negative number means gene expression down-regulated in said condition, and positive number means gene expression up-regulated in said condition.
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Two technical replicates were performed for each hybridization and the logarithmic transformed (base 10) mean gene expression ratios were taken for further analysis.
We compared the correlation between sample datasets of the same pool but derived from different platforms, using the intra-sample normalization 'Mean' method (by which each value is expressed as percentage of the mean gene expression value for that sample).
The mean gene expression showed a maximum on chromosome 9 (Figure 9F).
ANOVA and Kruskal-Wallis tests were used to compare the mean gene expression across the genotypes (Table S2).
The blue line shows the mean gene expression for the human macrophage data and the gray lines represent the dynamics of single genes.
In this panel, the region below the horizontal (black) line includes pathways that exhibit a reduction of their (mean) gene expression.
The mean gene expression values for each group (exposed versus control) were compared and p-values calculated using unpaired Student's t-test.
μ represent the mean gene expression.
µ is the mean gene expression level across all samples.
Mean gene expression was calculated for the sample replicates.
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