Sentence examples for mean sequence depth from inspiring English sources

The mean sequence depth was 874 1,457× per base.

The first two moments of our simulated data were examined, resulting in a mean sequence depth of around 1950 reads per pool and variance of 12 026.

First, we simulated Escherichia coli read data with mean sequence depth from 5 × to 100 × to investigate the computational complexity of the overlap algorithms as a function of depth.

The mean sequence depth of the known SNVs is 59x (CTRL 49x, DEFA 54x, DEFB 71x) and 58x for the putative novel variations (CTRL 37x, DEFA 53x, DEFB 65x).

The total assembly length of PUTs longer than 150 bp was just over 18 Mbp and the mean sequence depth of these PUTs as measured by RPKM (reads per kilobase of transcripts per million of mapped reads) was 281.

Except where stated otherwise, our inter-population comparisons, however, were performed setting the minimum coverage of these variants to 5, given that the mean sequence depth was only 19 in CROATIA-Korčula.

Remarkably, MALBAC has low amplification bias and can achieve 93% genome coverage ≥1× and 25× mean sequencing depth in a single cell during WGS.

MALBAC provides high uniformity in coverage across the genome (93% coverage of at least 1X at a mean sequencing depth of 25× for a single human cell) and is useful for detecting copy number variants (CNVs) in single cells; however, MALBAC has a high false positive error rate and is not appropriate for detecting point mutations [8].

Using specifically developed statistical methods that account for DNA pooling, low mean sequencing depth, and sequencing errors, we provide genome-wide estimates of nucleotide diversity and genetic differentiation in pig.

The mean sequencing depth was 8 to 10 times.

Mean sequencing depth per base for phase 1 samples was 1,999, rising to 4,035 for phase 2 samples.