Sentence examples for mean sequence conservation from inspiring English sources

We found that the aligned T. biloba sequences were 82.3% conserved (mean sequence conservation taken from a subset of 500 BLAST hits) indicating that BLAST may not be sufficient to identify some sequences.

Genepleio has implemented the following procedure to estimate K. (i) Calculate the d N / d S ratio (the ratio of nonsynonymous to synonymous rates) used as an empirical measure for the mean sequence conservation.

Moreover, we calculated the mean sequence conservation (the d N / d S ratio) in both groups: d N / d S  = 0.12 for young duplicates and 0.02 for ancient duplicates.

This means that the sequence conservation observed in exons may be the result of two types of selective pressures.

No significant correlation was detected between mean shift and interspecies sequence conservation level or distance from stop codon or polyA signal for each microsatellite (|r|<0.1).

This analysis compares genes that have branched apart at the speciation event, which means all differences in sequence conservation or expression context conservation are due to orthologous group specific evolution rates.

Sequence conservation meant that a relatively small number of 'forward' (3') and 'backward' (5') primers could be used to amplify a large proportion of the V-domain repertoire from an appropriate source, including peripheral blood.

IDRs share some common sequence features such as low abundance of order-promoting and high abundance of disorder-promoting amino acids, low sequence complexity, poor sequence conservation, low mean hydrophobicity, high net charge, etc. (Dunker et al., 2001; Nishikawa et al., 2010; Romero et al., 2001; Shimizu et al., 2007; Uversky et al., 2000).

The results shown in Figure 8B show that this correlation between sequence conservation and mean expression level can clearly be seen in the wheat and barley transcriptomes, even though we use the comparatively rough measure of a Blast hit E-value to quantify sequence similarity.

The two categories with the highest mean scores, or highest amino acid sequence conservation, are responsible for protein synthesis and degradation (the proteasome), essential housekeeping functions.

For protein-coding genes, codon models of substitution provide means to expand inferences from simple sequence conservation to more sophisticated modeling of codon substitution through time driven by selection and mutation [ 11- 17].