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Finally, we used a very high-density array (mean probe spacing of 214 bp) to interrogate 241 deletion-CNV and 105 gain-CNV regions identified by the 2.1M array across the 7 test strains.
The mean probe spacing was 2557 bp and the median probe spacing was 2586 bp.
The SNP genotyping resolution was 50.9 kb (mean probe spacing), whereas that of the aCGH platform was 6.3 kb.
aCGH was carried out using the Agilent 244K chicken array with a mean probe spacing of 4000 bp.
The set array contains ~262,000 (Nsp I array) and ~238,000 (Sty I array) SNPs (mean probe spacing = 5.8Kb, mean heterozygosity = 27%%).
The chip contains 12 individual lanes, each spotted with 136,929 oligonucleotide probes with a mean probe spacing of approximately 560 bp.
Similar(48)
Specifically, the mean probe space varied depending on the length of the tiled region.
The average probe spacing is 13 Kb.
Overall, the chip contains 598,733 probes with an average probe spacing of 157 bp.
Each design covered a specific set of chromosomes with 2.1 million probes, which yielded 420 bp of average probe spacing (301 bp median probe spacing).
The mean and median probe spacing for the array are 2557 bp and 2585 bp, respectively.
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