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Even though taxonomical orders showed variation in the mean predicted probabilities, none of the taxonomical orders were found to have significantly higher probabilities for hosting flaviviruses in stratified models, except for primates which were found to have a significantly higher probability as YFV and ZIKV hosts.
Mean predicted probabilities for hosting Group 3 viruses for families within Chiroptera were not significantly different from each other (Mann–Whitney Wilcoxon Bonferroni-adjusted P > 0.05), but leaf-nosed bat species (Phyllostomidae) had the highest mean probability of 26% (SD = 24.2, n = 10, Supplementary Figure 12).
Order Cetartiodactyla (mean = 3%, SD = 7.0, n = 45,) showed significantly higher average mean predicted probabilities than Passeriformes (mean = 2%, SD = 7.0, n = 135, Mann–Whitney Wilcoxon Bonferroni-adjusted P = 0.048) and Primates (mean = 2%, SD = 3.0, n = 12, Mann–Whitney Wilcoxon Bonferroni-adjusted P = 0.023).
Table 3 presents the mean predicted probabilities for each score on the Wells rule.
IDI was calculated as the difference in mean predicted probabilities between cases and controls between the two models [ 16].
Thus, we will create calibration plots at fixed time points by comparing mean predicted probabilities with Kaplan-Meier estimates of observed rates stratified by intervals of predicted risk.
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Nevertheless mean predicted probability for depression in PREDICT-D study is only around 0,15.
d A bootstrapping calculation was used to estimate the distribution of the mean predicted probability scores for BD patients, SIs, and HCs.
c A bootstrapping calculation was performed to estimate distribution of the mean predicted probability for BD patients and HCs in the discovery cohort Fig. 3 a A bar graph showing LASSO algorithm coefficients assigned to the most relevant CANTAB neurocognitive measurements.
In patients with cancer, the mean predicted probability was almost twofold higher, notably for lower scores on the Wells rule.
The results indicate that the predicted probability of poor prognosis in those Gleason score 7 patients (i.e., the within-patient mean predicted probability) ranges from 0.340 to 0.467.
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