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Mean PIC values were compared with Wilcoxon test (α = 5%).
In WOSR, the mean PIC values were not very different between the three seed quality types.
Observed mean PIC values are higher for the six-rowed group (0.31) than for two-rowed barleys (0.27).
The mean PIC values of A8 and A9 were highest, nearly 0.32, whereas that of C7 was lowest, only 0.254.
The mean PIC values were also estimated for the whole collection with the mapped SNPs from the 1536 SNP subset.
Mean PIC values estimated on the A, C and whole genomes are given for each subgroup of the collection and on the whole collection with the full set of SNPs or the 1536 SNP subset.
Similar(52)
PIC values ranged from 0.0 – 0.78 with a mean PIC value of 0.47 ± 0.17.
The global average PIC value was 0.41; loci on chromosome E02 had a low mean PIC value (0.28), while the mean PIC for the remaining loci on a chromsome-by-chromosome basis lay between 0.38 and 0.46 (Additional file 2: Figure S1B).
The mean PIC value of 0.60 over 25 loci shows that the majority of the microsatellite loci are highly informative.
The highest genetic diversity is explained by the landraces included in this study with the mean PIC value of 0.416.
The mean PIC value was 0.650, ranging from 0 to 0.965.
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