Sentence examples for mean methylation score from inspiring English sources

Non-parametric (Kruskal-Wallis) and parametric (Linear Regression) tests generated p value statistics for the mean methylation score with respect to genotype status.

In assessing megabase regions of the genome, methylation patterns were obtained by computing the mean methylation score difference between abuse and non-abuse groups for each probe, generating a UCSC wiggle track file from these differences and then uploading it for display on the UCSC genome browser (http://genome.ucsc.edu/).ucsc.edu/

Although the mean methylation score across the amplicon as a whole was consistently between 42.1% and 44.2% (Table 1), close to the expected 50% for a faithfully maintained germline DMR, the individual methylation scores of the 17 CpG units analyzed ranged between 20% and 65% (Fig. 3A).

The comparison of probes between periodontitis and normal gingival tissues showed that the mean methylation scores and the frequency of methylated probes were significantly lower in genes related to the immune process.

A mean Z score was calculated by integrating the promoter-specific Z scores and used as a simple score characterizing mean methylation density.

One is the statistics of mean difference of methylation scores of two groups of genes divided by their variance.

At each p value cutoff point, we calculate the two statistical measurements: "T.stat", that is, mean difference of methylation scores of two groups divided by their variance, and "AUC", that is, the AUC of a ROC curve, for each of the 20 preprocessing methods.

CGIs were considered methylated with a methylation score >0.75 and unmethylated with a methylation score <0.25.

That is,, where,, and are the mean and variance of methylation scores for known methylated genes and housekeeping genes respectively, we call this measurement "T.stat".

We further validated the B-cell score by comparing the change in mean somatic allele frequency with the B-cell methylation score (Supplementary Figure 1d).

For each DMR we assigned a methylation score equal to the weighted mean methylation at each CpG site in the DMR (Schultz et al., 2012) for each of the 140 strains.