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Of the 45,878 SNP markers, 45,461 had known chromosome positions with mean marker spacing of 58.45 kb.
The 1M SNP array contains 1,072,820 SNP markers at an average inter-marker distance of 2.7 kb while the 1M-duo chip contains 1,199,187 SNPs with a mean marker spacing of 1.5 kb.
However, histograms of interval sizes on the MUGA array show a drop in the numbers of small segments relative to their expected distribution at sizes below the mean marker spacing, indicating that small haplotype blocks may be lost in the reconstructions.
Similar(57)
When comparing the average marker spacing with mean core length and number of SNPs forming cores, we revealed that core regions are more likely to appear in regions with higher marker density.
A genome-wide scan of 1,122 microsatellites (average marker spacing of 3.6 cM and mean marker heterozygosity of 0.70) was performed by the deCODE genotyping service.
The markers are distributed with a mean of 38 markers per linkage group and an average marker spacing of 2.8 cM.
With a mean of 584 markers per map, including identical loci, these maps have an average marker spacing of 1.04 cM.
Average marker spacing was 66.5 kb.
The average marker spacing was 2.2 cM.
On this map, the average marker spacing was 2.8 cM.
The average marker spacing of the single copy Y STS markers is 128 kb.
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