Sentence examples for mean distance matrix from inspiring English sources

They could be organised into a mean distance matrix characteristic of Type 1 neck gene organisation.

From these calculations we deduced a tolerated distance matrix, formed by adding to each mean distance matrix term twice the inter-gene distance standard deviation.

Specifically, x is expressed as (2) x = 6 ν (δ a i, a j − ν ), where δ a i, a j is a distance or dissimilarity between two proteins, ν is a smooth threshold (chosen as the mean of the distance matrix), and 6/ ν is a heuristically chosen parameter of the slope in our calculation [ 30].

Instead, the clustering procedure keeps track of their members by means of a distance matrix d ((ktimes n) where k is the number of clusters and n is the number of objects).

We tested the effects of climatic variables (temperature, precipitation), landscape attributes (number of patches, mean inter-patch isolation distance, matrix modification index) and patch size on the population density using linear models and the Akaike information criterion.

We performed Non-metric Multi Dimensional Scaling (NMDS) to explore patterns in phylogenetic community composition using both the unweighted UniFrac & β-MNTD (β-mean nearest taxon distance) distance matrix with Primer-6 software53.

These clusters were generated by applying the k-means algorithm to a distance matrix between the amino acids based upon BLOSUM62.

Moreover, we try an innovative ensemble classifier building method called LibD3C [ 11], which is a hybrid method using k-means clustering on the distance matrix between classifiers, built from their distances between classification output distributions over the training sample, and a combination of dynamic selection and circulation of the selected classifiers.

Based on these particle tracking simulations, we calculated a distance matrix of Mean Connection Time (MCT in days) between release locations27.

First, the between group mean distance (Kimura 2-parameter model) matrices based on the 17 populations and 15 populations (GD and ZK excluded) were calculated with MEGA (version 5.2) [ 37].

Pair wise comparisons of amino acid sequences between clones were performed to determine the mean and range of pair wise distance matrix (p-distance) using the program MEGA version 3.1 (Molecular Evolutionary Genetics Analysis, Pennsylvania State University, PA).