For simplicity, hereinafter the words 'genome' and 'proteome' are used interchangeably (e.g. protein domain assignments for a genome actually means assignments for the proteome encoded by the genome).
"1" means assignment is chosen".
For example, if x = ⌊ 3. 8 ⌋, then x ≡ 3 where " = " means assignment and "≡" indicates the equality test.
Samples collected after 1959 showed much more admixture and the mean assignment probabilities of the wolves to other than their own or first temporal group were 0.29 0.47.
Our data suggest that our highest elevation parviglumis population, Ahuacatitlan, is extensively admixed, with mean assignment probabilities to mexicana of approximately 50% across individuals in the population.
For purposes of this study, localities with a mean assignment to a single cluster higher than 0.8 pp were considered "parental localities", while those with assignments lower than 0.8 pp were considered "admixed localities".
We used Fstat v2.9.3.2 [ 48] to test whether the observed population structure could be attributed to differences in dispersal between sexes and used four statistics: differentiation among populations (FST), mean assignment indices (mAIc), the variance in assignment indices (vAIc), and mean pairwise relatedness (mPr) [ 48, 59, 60].
The results of four tests (FIS test, FST test, corrected Mean Assignment Index test and variance of corrected assignment test; see material and methods and [ 56] for details) are shown for females (F) and males (M) as sampled in 1991/93 and 2004.
On the other hand, mean assignment probability of wolves in the second temporal group to the latter groups were quite high suggesting that in the subsequent periods there were still substantial amount of genetic variation which was present in the second temporal group.
Tightened news budgets mean fewer assignments.
