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Mean alignment span for the 376 hits was 242 bp with a mean E-value of 4.4e-22 4.4e-22
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For these 14,543 whole-gene alignments, the mean alignment length was 1,541 bp.
The resulting alignment spans 2045 characters.
For all reads where no one alignment spans 90% of the total read length, breseq examines all pairs of alignments reported between the read and the reference genome.
1376 species remain in the alignment, spanning 374 genera, with a total alignment length of 22,612 sites (summarized in Table 1).
Therefore, a sequence similarity of 45% with an alignment spanning over at least 45% of the query length was used.
Within 55 individuals we found 25 unique sequence haplotypes for which we produced an alignment spanning 528 characters.
"It means alignment.
PfFSmat60 has been demonstrated to perform best for pair-wise alignments [ 2], where the alignments span motif like regions of the protein.
Although the mated animals generated an average of 630 progeny, the mean body movement span, pharyngeal pumping span and life span were similar to sterile animals.
Although the mated hermaphrodites generated an average of 380 more progeny than self-fertile hermaphrodites, the mean body movement span, pharyngeal pumping span, and life span were similar.
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