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We removed genes for which d S > 1 on any branch or d S > 0.5 on any branch excepting mouse, as these outlying values may reflect alignment or sequence artifacts.
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Consequently, reduced X-chromosome diversity may reflect poorer alignment or mapping to the An.
Such tissue overlap may reflect (incorrect) alignment of a contig to a protein which shares a conserved domain but has a different function.
The smaller degree of texture in RS-1 may reflect diminished alignment with the external field, but also an overlay of different crystal orientations due to magnetosomes in different stages of maturity, from isometric <111> oriented crystals in the early stage to mature crystals highly elongated along <100>, with a continuum of hybrid states in between.
While it appears from our results that alignment masking is not necessary when ML is used to infer the phylogeny, this may reflect the lack of alignment error in the simulated data.
FA measures deviation from isotropy, and may reflect the degree of alignment of cellular structures within fiber tracts, as well as their structural integrity [51]; however this interpretation may be invalid in voxels containing crossing fibers [52].
These white matter differences may reflect variations in axonal density, diameter, or alignment.
An activated form of the response regulator CheY destabilizes the parallel arrangement of FliM molecules to perturb FliG alignment in a process that may reflect the onset of rotation switching.
These alignments generally resemble conjugate structures and may reflect a hydrothermal system beneath the volcano.
The number of underlying individual transcript alignments exhibiting a specific splicing variation may reflect the in vivo prevalence of the variation as compared with the number of transcripts exhibiting a mutually exclusive variation.
This may reflect regional differences in long-term risk of knee OA, as valgus alignment has been associated with a nearly 5-fold increase in lateral progression, and varus alignment with a 4-fold increase in medial progression of knee OA (Sharma et al. 2001).
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