For these reasons, clustering genes with similar expression patterns may allow to assign putative functions to unknown genes via "guilt-by-association" [ 29].
Moreover, we were able to assign putative functions to novel sequences that may provide further understanding of plant oomycete pathosystems.
By aligning query sequence against annotated sequence we may assign putative function by EC number association.
BLASTX was used to assign putative functions to virtual translations of each library specific assembly.
The sequence alignment was done to assign putative function to newly predicted genes by BLASTX [ 18].
Sequence similarity was used to assign putative function(s) to the identified grapevine orthologues.
We describe their phylogenetic relationship and try to assign putative orthologs from barley, Arabidopsis and rice.
Phenotypic profiling is a useful method to assign putative functions to uncharacterised genes.
These 54 CYP families were then used to assign putative functional roles to the respective clans.
GeneFriends can be used to assign putative functions to poorly studied genes.
BALBOA is then used to assign putative functional annotations to unclassified yeast ORFs.
