Sentence examples for maximum tree length from inspiring English sources

This resulted in a maximum tree length of 8 for 4-taxa analyses and 6 for 3-taxa analyses.

Regardless, we chose to be somewhat conservative by setting a maximum tree length cutoff (# substitutions per codon) of 2 times the number of taxa in the tree.

These model trees were simulated under a Yule process, with birth rates set to 0.000001 (per generation) and the maximum tree length set to 2 million generations.

The remaining 3701 ortholog groups were run as pairwise comparisons between clades C and D; however, only 2418 of these were under our maximum tree length threshold (average tree length = 1.7).

The topology with the minimum tree length is known as the Maximum Parsimony tree.

A heuristic search of the combined loci found 110 maximum parsimony trees (Length 1089, CI 0.864, RI 0.984) without introns and 1023 maximum parsimony trees (Length 1706, CI 0.866, RI 0.984) with introns.

A heuristic search of the ACT1 gene sequences resulted in two maximum parsimony trees (Length 351, CI 0.855, RI 0.957); the URA5 gene produced 1152 maximum parsimony trees (Length 208, CI 0.897, RI 0.973); the PLB1 gene produced six maximum parsimony trees (Length 395, CI 0.922, RI 0.994); and the IDE gene produced 24 maximum parsimony trees (Length 113, CI 0.912, RI 0.993).

A heuristic search of the ACT1 gene sequences found five maximum parsimony trees (Length 796, CI 0.884, RI 0.928).

The summed tree length of the maximum parsimony trees of each locus found for the original dataset was compared to the summed tree lengths of the maximum parsimony trees of each locus for the artificially created dataset.

For each orthologous set, we have calculated the tree length from a maximum-likelihood estimate using the program RAxML with the JTT matrix as substitution model.

Maximum parsimony produce the following trees: cox2, tree length, 1316, Consistency Index, 0.581; rrnL, tree length, 930; Consistency Index, 0.713.