The expression values of each transcript are permuted, the association statistics of each transcript with all SNPs are calculated and the maximum transcript-specific association statistic is retained.
Specifically, we calculated specificity scores for each transcript, inspected the top 5%% most stage-specific transcripts, and compared transcript specificity scores by transcript class.
This potential effect would have implications for, e.g., the time of day when maximum transcript regulation was observed.
Until recently probe sets were not designed for transcript specificity.
In addition, the maximum transcript levels were significantly higher in Wangshuibai than in the mutant.
The mean transcript length, maximum transcript length, and N50 size of Trinity transcripts were 1112, 22,887, and 1863, respectively.
Maximum transcript length was found to be 15,764 bp with an average transcript length of 1,221.2 bp.
GETPrime primers have been extensively validated experimentally, demonstrating high transcript specificity in complex samples.
In addition, the 5'UTR of a maximum transcript has overlapping 9 and 3 codon uORFs.
Maximum specificity is observed for 17 features (specificity plot, red dot).
