Sentence examples for maximum transcript length from inspiring English sources

However, the maximum transcript length was 21,724 and 16,659 bp in the tribblei and lenavati reference assemblies, respectively.

Maximum transcript length was found to be 15,764 bp with an average transcript length of 1,221.2 bp.

The mean transcript length, maximum transcript length, and N50 size of Trinity transcripts were 1112, 22,887, and 1863, respectively.

According to gene expression measures from MPSS experiments, extreme transcript lengths (or total/average intron lengths, number of introns per gene) scale as power-laws of expression level, which could be expressed as: L max ∝ N- α, where 0 < α < 1 is the exponent of power-law and L max represents the maximum transcript lengths for genes expressed at each level.

For each of the K-mer various assembly parameters (such as number of contigs, assembly length, minimum, maximum and average transcript length and N50) were evaluated.

K-mer size of 23 mer emerged as the best choice for performing assembly, as it had a balance between over-represented and under-represented transcript numbers, coverage, maximum length obtained and average transcript length (Table 1).

We employed a graphical (real-length) representation, where profiles were centered on the actual TSS [ 38], and the data for each probe corresponded to the distance from the TSS up to the total transcript length, with a maximum of 3000 bp.

Second, our length fractionation procedure had a theoretical maximum resolution of about 5 6% of total transcript length.

In the best group representation, 12,706 transcripts were found to be ≥ 1000 bp with a maximum length of 15,764 bp and average transcript length of 1,364.09 bp.

The result from the Velvet-Oases pipeline indicated that in comparison with individual k-mer assemblies, the merged assembly with k-mer size of 55 yielded the best assembly because it had the maximum number of transcripts (601,915), largest average transcript size (1553 bp), largest transcript length (26,060 bp), and highest N50 length (2218 bp) (Table 4).

The maximum length of the transcript was found to be 15,501 bp and average transcript length was 1,114.72 bp with N 50 value of 1,728 bp and high coverage of 295X (Table  2).