Even with this deep sequencing, nearly 13% of the last 637 reads were novel (< 99% over 100 bp) and the maximum redundancy for a single transcript from the rgb2 library was 58 (Table 1).
However, local deduplication cannot achieve the maximum redundancy.
The redundancy index RE takes a value between zero and unity with zero for no redundancy, and unity for maximum redundancy.
In contrast, global deduplication can achieve maximum redundancy but compromises on the hashing overheads.
Four functions are defined to model the biologically relevant gene interactions of cooperation (sum of mRNA expression), competition (difference between mRNA expression), redundancy (maximum of expression), or dependency (minimum of expression) among the expression levels.
Therefore, we propose that the developmental reversal of dominance of dwarf gene is caused by the partial overlapping redundancy of GA20-oxidase genes in C. maxima.
Furthermore, if an arc is longer than the maximum correlation length of the atmosphere, it will be eliminated, which further reduce the redundancy of the Delaunay network.
The overall redundancy of the MGA was calculated to be less than 5.3%, thus a maximum of 138 of the 2,614 DNA fragments have a sequence overlap with another insert.
The NaCl-induced expression of the gene encoding one among them, the choline transporter, was the maximum in the group; two isoforms were found to be expressing with a combined EST redundancy of 2.82%.
In addition, the redundancy of the Leapfrog, DuFort Frankel, and Lax schemes and the remedy for this redundancy are discussed.
