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The SSR markers were assigned to linkage groups (LGs) based on a maximum recombination fraction of 0.34 and a minimum logarithm of odds (LOD) score of 6.0.
A genomewide scan identified a region on the long arm of chromosome 6 that is significantly associated with the presence of myopathy (D6S262; maximum LOD score [Z(max)] 4.99 at maximum recombination fraction [theta(max)].00), identifying FDC-CDM as a genetically distinct disease.
The logarithm of odds (LOD) threshold was 4.0, and the maximum recombination fraction was 0.4.
Linkage parameters were set as 3.0 minimum LOD and 0.45 maximum recombination fraction.
First, linkage groups were formed with LOD = 12 and a maximum recombination fraction of 0.01.
Linkage groups were created using a minimum LOD score of 4 and maximum recombination fraction (RF) of 0.25.
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The markers were classified into linkage groups (LGs) using the minimum LOD threshold of 3.5 and maximum of 5.0 with recombination fraction of 0.4.
The method used was based on maximum likelihood estimates of the recombination fraction [ 21].
For the pooled analysis of the three families, three markers on chromosome 22 had two-point logarithm-of-difference (lod) scores greater than 3, with a maximum lod score of 3.91 at a recombination fraction (theta) of 0.076 for marker D22S683.
Markers that could not be ordered with the same degree of confidence were added as accessory markers, using the two-point LOD scores and recombination fraction available from the "maximum linkage" table of JoinMap.
This locus spans 5.5 Mb and is linked to the merle coat colour with a maximum Lod score of 19.87 and a recombination fraction of 0. We are currently analysing this locus in several breeds segregating merle, with a high density of single nucleotide polymorphic markers (SNP).
More suggestions(15)
maximum fuel fraction
maximum mole fraction
maximum recombination efficiency
maximum recombination distance
maximum particle fraction
maximum recombination frequency
maximum mass fraction
maximum gel fraction
maximum volume fraction
maximum filling fraction
maximum mixture fraction
maximum sp3 fraction
maximum recombination break
maximum packing fraction
maximum noise fraction
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