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It enables users to set the maximum permitted total of quality values at all mismatched positions throughout the entire alignment (i.e., the "-e" option when setting parameters to run Bowtie).
Sequence mapping was done using bowtie software [ 18] in a Galaxy setting, with maximum number of mismatches permitted [n] = 2, maximum permitted total of quality values at mismatched read positions (-e) = 70, and maximum alignments authorized [m] = 10.
In addition, to obtain reliable GCNVs that were not affected by the mapping parameter selection, we adopted three different values (70, 100, and 130) for the '-e' option, which designated the maximum permitted total quality values at all mismatched positions throughout a read alignment.
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The maximum permitted field of forty runners competed for prize money totalling a record £950,000, making it the highest valued National Hunt race in the United Kingdom.
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Last year he claimed the maximum permitted, £23,083.
Class size pushed to about 34 students, the maximum permitted by the Board of Education.
He visited the library three times a week, the maximum permitted.
The figure is the maximum permitted by the watchdog, which comes after Facebook lost an appeal.
The increase was the maximum permitted in the savings bailout legislation adopted last year.
Yet its vice chancellor, Patrick McGhee, is unabashed about charging students the maximum permitted fee.
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