Tree searches were executed from a random stepwise-addition maximum parsimony tree and employed the GTRGAMMA nucleotide substitution model.
Fig. 5 Maximum parsimony tree of arsB Permease sequences.
Figure 1 Phylogenetic maximum parsimony tree of the sequence groups (SGs) based on the small subunit of rDNA.
A maximum parsimony tree was built using Mega 4.0.
Figure 1 shows the maximum parsimony tree returned by cladistic analysis of the handaxe dataset.
One hundred bootstraps were made starting from a maximum parsimony tree.
The topology with the minimum tree length is known as the Maximum Parsimony tree.
A maximum parsimony tree was built using the genetic information from the entire mtDNA molecule (excluding the fastest mutational variants).
The results of the bootstrap analysis strongly support the phylogeographic pattern indicated in the maximum parsimony tree (Figure 2).
The variant EG95 amino acid sequences identified in the present study were aligned and used to draw a maximum parsimony tree.
However, like the maximum parsimony tree (Figure 3), there is little bootstrap support for deep branches in the neighbor joining tree (Figure S4).
