Sentence examples for maximum likelihood distance from inspiring English sources

We calculated maximum likelihood distance matrix, using DNA sequence from six nuclear loci, to represent phylogenetic differences among taxa.

All breeding characters showed a significant phylogenetic autocorrelation at a maximum likelihood distance <0.06 0.08 (Z≥1.96; Fig. 3), except for body mass (max. Z = 0.5).

Phylogenetic analyses were performed with the ARB software package (http://www.arb-home.de; [88]), where initially, near full length 16S rDNA (∼1400 bp) sequences obtained from the GenBank searches were used to construct phylogenetic trees based on maximum likelihood, distance and maximum parsimony methods.

Maximum likelihood distance values at different hierarchic levels (in percentage).

Maximum likelihood distance values between clades (in percentage).

JoinMap 4.1 was used for marker grouping using two-point maximum likelihood distance analysis.

For TREE-PUZZLE analysis, pairwise maximum likelihood distances were estimated under the WAG+Γ+I model with 4 and 8 discrete Gamma distribution rates for EEF2 and the concatenated data set, respectively.

Additionally, we clustered taxonomic units with neighbour-joining (NJ) [ 46] using maximum likelihood distances.

Figure 1 depicts the saturation plot of flaA sequences using maximum likelihood distances.

Maximum likelihood distances were calculated with the NJdist and ProtML programs in MOLPHY [ 66].

In addition, maximum likelihood distances for the complete edge-trimmed alignment were generated by TreePuzzle [ 123].