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For example the maximum homology between the latest aquaporin identified in mouse (AQP12) with the other mouse AQPs is 38.9% [ 32].
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Otherwise, the divergences in lineage 1 ranged from a maximum of 10.6% between CAR isolate ArB 310 and Ivory Coast isolate ArA 3212, to a maximum homology of 99.6% between a Senegal isolate AnD 27875 and Algerian isolate Ar/Djanet.
NCBI BLAST search of the sequences of the fungi FVP4 showed maximum homology with A. bombycis.
Phylogenetic analysis showed conserved regions at different stretches with maximum homology in amino acid residues within all SQSs.
Sequence analysis revealed that SP1 belongs to B. amyloliquifaciens, as it showed maximum homology (92 %) with B. amyloliquifaciens (accession no. Eu855195) (Fig. 1).
This protein showed maximum homology of 56% 33%% identity) with the PvTRAg35.2 of P.vivax (Fig. S1).
Among species-specific miRNA, rice had maximum homology followed by maize and Medicago truncatula (Fig. 5).
Only two types of sequences exhibited maximum homology to the target FASTA sequence, presented in Figure 1.
This was accomplished with the tool CD-HIT [34] with a maximum of 65% homology between representative sequences.
In this study the maximum unique homology matches between two sets of six neighboring genes (three upstream and three downstream neighbors) was used.
Homology between the clones was relatively low at a maximum of 49.4%, but not surprising as homology within aquaporins is generally low.
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