Your English writing platform
Free sign upSuggestions(1)
Exact(3)
The sensitivity and specificity of these tools, however, crucially depend on parameters such as seed sizes or maximum expectation values.
Acceptance criteria for the reported results were as follows: minimal scores for proteins and peptides were 22 and 15, respectively, and maximum expectation values for proteins and peptides were 0.05 and 0.1, respectively.
We found that there was near-complete overlap between the psRNATarget predictions and those from TargetFinder and the UEA toolkit tool but with fewer predicted targets using the maximum expectation values of two.
Similar(57)
A maximum expectation value of 0.1 was employed as a threshold for peptide identifications.
The maximum expectation value was set to 10-3, and a maximum of 25 alignments were reported per hit.
Further, the maximum expectation value was set to 2.0 for stringent filtering of false positive targets predicted by the server.
We set the maximum expectation value in BLASTN searches to be e = 10-4 to recover hits that are biologically significant.
Although likely to exclude a number of bona fide targets, we used a maximum expectation value threshold of two in order to minimise false-positives.
Maximum expectation value for accepting individual peptide ion scores [−10*Log(p)] was set to ≤0.05, where p is the probability that the observed match is a random event.
Because the chip covers 31 099 genes, the maximum expectation value of false positives for each comparison is 3.1 (=31 099 × 0.01 x 0.01).
The maximum expectation value was set to 10-5, the minimum alignment length was set to 50 bases, and the minimum percentage identity was set to 50%.
Write better and faster with AI suggestions while staying true to your unique style.
Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.
Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com