Sentence examples for maximum contig length from inspiring English sources

Importantly, we subsampled our data and found that this assembly routine produced a very respectable assembly (maximum contig length = 12,688 bp and N50 = 784 bp) with only single paired-end lane of Illumina sequence reads, suggesting that significant progress can be made with very little sequencing cost.

We produced contigs from each RAD sequence with an N50 length of 3,807 bp and a maximum contig length over 5 kb (Figure 5E, File S10). Figure 5D shows an example of the pileup of reads around one SbfI site and the resulting contigs assembled from each tag.

Using CAP3, we are able to achieve a maximum contig length of 3620 bases as compared to maximum contig length of 2607 bases by Newbler [ 34].

We report N50 and maximum contig length for each resulting assembly.

The best subset yielded 34 contigs with a maximum contig length of 732,626 bp.

The numbers of mapped reads, genome coverage, depth, and maximum contig length are reported.

Maximum contig lengths and N50 values were tabulated, and the best assembly for each sample was selected for further analysis.

A mean contig length of 895.2 bp was obtained in the bovine T. foetus transcriptome, with minimum and maximum contig lengths of 201 bp and 14,314 bp respectively.

Comparing the assemblies, IDBA-tran assemblies were chosen as the basis for our analyses, based on both the generally longer average and maximum contig lengths.

The de novo assembled transcriptome using Trinity [ 72] resulted in 230,626 contigs with a N50 of 1,146 bp and minimum and maximum contig lengths of 201 and 27,427 bp, respectively.

Illumina sequencers are not able to easily sequence DNA fragments greater than 1 kb in length, limiting the maximum possible contig length produced by the above protocols.