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As in the serial algorithm, computing the maximum by looping over all the entries is the expensive part of the computation and will be optimized.
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Capillary width is also known as "loop width," "maximum loop width," "total width," "total caliber of loop," "capillary loop amplitude," "total capillary width," and "external diameter".
We set up the QGRS-mapper software to identify all PQS with four repeats of at least three guanines interrupted by loops of a maximum length of 11 nucleotides.
We then developed a set of features to discriminate between miRNA and non miRNA hairpins: folding energy, total and maximum internal loop size and symmetry, arms and terminal loop sizes; GC%, complexity score (in terms of repetitions of small motifs) and the score delivered by the Microprocessor SVM [ 37] which characterizes the presence of a Drosha recognition site.
Parameters used were: default window parameter, maximum interior/bulge loop size = 30, Maximum asymmetry of an interior/bulge loop = 30, and no limit on maximum distance between paired bases.
Standard constraint parameters were used with the following: maximum interior/bulge loop size was 30, maximum asymmetry of an interior/bulge loop was 30 and there was no limit on maximum distance between paired bases.
However, the maximum achievable closed-loop bandwidth is limited by the very same dynamics.
We explicitly show how this density is affected by loop mergers and loop generation.
If the iterations are less than the given maximum loops and the global difference Eg is great than the given threshold, update S i 0 by S i 0 = S i 1 and goto 2; 5.
However, whereas Vine and Instagram are all about short video clips filmed and uploaded by users, Coub places more emphasis on clipping — a maximum of 10 seconds in length — and looping existing content pulled in from Vimeo and YouTube, as well as adding an optional music soundtrack.
Recently, the implementing loop called maximum likelihood vector tracking loop (MLVTL) was introduced in [12].
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