Sentence examples for maximum bit score from inspiring English sources

For each query, the query bit score was divided by the maximum bit score for all genomes in order to calculate the Blast Score Ratio (BSR) [ 40– 43] allowing the conservation of peptides in each genome to be defined.

The conservation scores were calculated by dividing the bit score of each hit by the maximum bit score value obtained from the sequence used to conduct the WU-BLAST search [ 92].

The overall improvement in maximum bit scores to active transposons indicates that the deRIP versions were significantly better matches to the functional transposons that were the presumed ancestors of the sequences in the Australian SN15 strain.

An artificial SP-HMM generated signal sequence of the maximum model bit score (HMM + 38) was selected as an ideal human signal sequence.

Because the only statistical difference between bit scores and e-values is the consideration of the total length of subject sequences which is constant for each benchmark and the length of the current query sequence which only varies a little throughout each benchmark we chose to use a minimum bit score instead of a maximum e-value as cutoff.

The minimum bit score selected was the average bit score of all BLAST results that yielded an e-value between 10 − 6 and 10 − 4.

We computed the cutoff values of the completeness analysis as maximum hmmsearch bit scores between the HMMER profiles and proteins from any transcripts of the eight species instead of the proteins from the representative transcripts of the genes.

Nearest neighbour (top bit score in maximum overlap) was established by BLAST using the NCBI website.

The observed frequency for each amino acid in each position is calculated as a bit score, the maximum possible being 4.32 bits.

Because the bit score used for classification is based on the maximum match value for each protein sequence, the scores obtained should follow an extreme value distribution.

Should there be several alignments with the same maximum edge correctness, we would prefer the alignment with the highest overall bit score as obtained by an all-against-all sequence alignment.