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The DNA motif search profiles (a positional-weight matrix) were constructed using the SignalX program.
The pangenome plot, and proteome matrix were constructed as described [ 42].
So, total 676 spots (26 × 26 matrix) were constructed on each '8p-specific' microarrays.
Linear regression models for unbalanced repeated measures (mixed model with compound symmetry correlation matrix) were constructed to determine the effect of time on caregiver quality of life.
Trees using ITS data matrix were constructed with Biomphalaria helophila as outgroup since no ITS sequence of I. exustus was available.
A task exposure and a job exposure matrix were constructed to examine the association between exposure to beryllium and the development of beryllium disease.
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Finally Contradiction Matrix is constructed.
In each group, a correlation matrix was constructed according to the relative abundance of the OTUs in each sample.
Both Dynamic Time Warping14 (DTW) and the Kolmogorov Smirnov statistic were used to measure the difference in shape between all insert profiles and a distance matrix was constructed.
Briefly, a Pearson product moment correlation matrix was constructed between over 4000 signature ncRNAs (from the fingerprints and SOM overexpression spots) and 18,295 unique protein-coding genes.
Once the matrix is constructed, its missing entries can be filled in by matrix completion.
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