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Exact(7)
Films of conducting polymers mimic, during electrochemical reactions, the composition of the intracellular matrix of functional cells and some of its reaction-based functions originating biomimetic multifunctional devices.
Matrix of functional annotations: binary annotation matrix A whose rows represent f different biological functions, e.g. GO categories or KEGG pathways, and whose cells hold indicator variables whose value depends on whether an annotation exists between the function i and gene product j.
Electrospinning of fibrous scaffolds containing nano-hydroxyapatite (nHAp) embedded in a matrix of functional biomacromolecules offers an attractive route to mimicking the natural bone tissue architecture.
To classify the species qualitatively by functional group and obtain the quantitative value of functional diversity, a presence absence matrix of functional traits was generated for each species, in each of the three reserves.
All subsequent reads were considered to be valid DNA or valid putative mRNA derived sequences and were annotated against the SEED database using MG-RAST (e-value <1×10−3; minimum length of alignment of 50 bp; minimum sequence nucleotide identity of 50%; [30]) to produce an abundance matrix of functional genes and protein-derived predicted taxonomies across the DNA and mRNA samples.
In the following sections, we use Y = { y 1, …, y m } to denote the low-dimensional vector representation matrix of functional labels.
Similar(53)
This principle is used to build a self-consistent matrix formulation of functional similarity that can be evaluated iteratively using only knowledge of the adjacency matrix of the network (based on functional annotations of genes).
These then form a matrix Z of functional parameter values, with each element z ij denoting the value of the j-th parameter in the i-th parameter set.
GFD selects the combination of distance and clustering algorithms that best fits the species distribution in the functional trait space by minimizing the dissimilarity between the distance matrix and the ultrametric matrix of the functional tree.
The Pearson correlation coefficient between any pair of regional time series is computed to form a 90 ∗ 90 matrix of the functional connectivity network.
We ask whether the GERP-DAF matrix of a functional category is different from that of the background, and assess the statistical significance of this using a chi-square test with 8 degrees of freedom.
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