Sentence examples for matrix of distance from inspiring English sources

An IBS matrix of distance (D) was constructed containing each pair-wise combination of all 392 individuals.

All CG14 predicted genes were used as queries to BLAST them against Nipponbare genes within the S1 regions, to generate a matrix of distance between genes used to draw the relationships between orthologous and paralogous genes (Figure S1).

A dendrogram was constructed based on the matrix of distance using Unweighted Pair Group Method with Arithmetic averages.

All sequences are compared to each other to generate a matrix of distance measures between each pair of sequences.

Figure 1 B shows a matrix of "distance of orthologs," which is defined by mean distance of ortholog pair over all genomes.

We constructed phylogenies from the N x N matrix of distance measures D ij for species i and j using weighted least squares [ 1] with weights proportional to the expected variance of distances calculated for Equation 1.

In addition, for the conversion of the matrix of distances into a dendrogram, two well-known phylogenetic algorithms, UPGMA and Neighbor-Joining [19] [21] have been included in Jerarca.

Supplementary sequences were aligned against the MSA of human GPCRs and the matrix of distances between supplementary and active sequences was calculated from sequence identity.

The locations of the five kindergartens in Chengdu are shown in Figure 2, and a matrix of distances between them (in Km) shown in the inset.

First, a matrix of distances were obtained using the Kimura 2-parameter model, and then we generated 1000 replications by bootstrap analysis.

First, supplementary sequences are aligned against the active MSA, resulting into a supplementary matrix of distances between the supplementary and active sequences.