Sentence examples for matrices were retrieved from inspiring English sources

For instance, we have observed that the relative 64×4 mutabilities are mostly much higher than 100% when they are estimated using coding regions whose GC matches the actual GC of the alignments from which the substitutions used to estimate mutation matrices were retrieved, rather than the equilibrium GC generated by the estimated matrices.

Human KRAB-A, KRAB-B, KRAB-b, KRAB-C, KRAB-L, BTB/POZ, SCAN, and FINGER HMM matrices were retrieved from previous analysis (Huntley et al. 2006).

Position-specific count matrices were retrieved from TRANSFAC database v12.1 [ 19] for the octamer (TRANSFAC id V$OCT_Q6) and the SOX-OCT joined motifs (TRANSFAC ids V$OCT4_02 and V$OCT4_01).

For these two cell lines, data sets deposited in the "Series Matrix Files" were retrieved.

To further elucidate which proteins build up the notochordal sheath, extracellular matrix (ECM) genes were retrieved from the annotated RNA-seq pool using Gene Ontology.

diazotrophicus PAl 5, G. oxydans H24, Ac. pasteurianus IFO 3283-01, and Granulibacter bethesdensis strain genomes; the relative presence/absence informations were retrieved from the OrthoMCL matrix generated above and organized in a new matrix.

Eight factors were retrieved from the Positive Matrix Factorization solutions and adding source profile constraints enhanced the interpretability of source profiles.

Table 3 Confusion matrix for Euclidean distance when 10 nearest neighbors were retrieved.

Pairwise evolutionary distances were retrieved as a 16SRNA distance matrix from the Ribosomal Database Project [ 28].

Identity and similarity values from all possible comparisons within each family were retrieved and are shown as matrix.

These stored scores were retrieved from the data warehouse when the distance matrix was assembled for 3-D clustering.