Sentence examples for matrices we inferred from inspiring English sources

To further investigate iMatrix and PPI matrices, we inferred the 701,897 potential peptide antigens with significant statistic from 389 pathogen genomes and modelled the TCR-pMHC interactions using available TCR-pMHC complex structures.

For each data matrix, we inferred phylogenies using both MP and ML methods.

With the PHYLIP package v3.68 [ 145] we constructed a neighbour-joining tree for the resulting 100 distance matrices and we inferred the majority rule consensus tree with support values for the splits in the consensus tree.

We see thus that from the transition matrices we can infer information both about the degree of persistence in each quintile and the degree of mobility across different quintiles.

However, we now add a user-defined parameter β and the ability to edit M, the input distance matrix, when we infer that an edge is likely missing (i.e. is a false negative).

By incorporating the regulatory network information with the regulatory strength matrix, we have further inferred the activities and interactions between transcription factors and their target genes.

We inferred CR distance matrices using all possible (a total of 22) combinations of conditioning genomes.

From the received packets arranged row-wise in a matrix, we have to infer first which packet(s) is are) in error, and then, within this(these) packet(s), where the error locations are and their values.

To interpret these components, we infer the matrix P(C m, O m | F m, Θ) of size of K× T using Equations (2) and (14), or (15) for each region.

Finally, maximum likelihood distance matrices were inferred using the model specifications from jModelTest; this was done with PUZZLE [ 22].

Distance matrices were inferred using the Jones, Taylor, Thornton (JTT) substitution model with PROTDIST in PHYLIP 3.6a3 [ 77, 78].