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We note that all code for calculating the confidences, for extracting pathway information from KEGG XML files, and for calculating the cDSD, caDSD and capDSD matrices is available from http://dsd.cs.tufts.edu/capdsd.edu/capdsd
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We assume that the MIMO channel matrices are available at the BS.
The average classifier performance for Nonpher, SAscore and DR methods is summarized in Table 1, performance measures of individual samples and their corresponding confusion matrices are available in Additional file 2: Tables S3 S5.
Design and contrast matrices are available upon request.
The MtZoa and MtHydro matrices are available at:.
Aligned matrices are available in Treebase, http://purl.org/phylo/treebase/phylows/study/12165.
The RBP annotation matrices are available only under this factor view tab.
All data matrices are available from Dryad (http://datadryad.org/) using identifiers doi 10.5061/dryad.8661 and doi 10.5061/dryad.8663.
Several methods for the comparison of covariance matrices are available (reviewed in [ 14]).
When multiple matrices are available, we consider the one with the largest information content.
In addition, synthetic ECM or peptide matrices are available from various manufacturers.
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