Sentence examples for matrices computed using from inspiring English sources

The correlations are based on separate distance matrices computed using gene expression data and clinical covariates.

In a recent work [ 11], we compared how much molecular relationship matrices computed using either complete sequence or ascertained SNPs were similar.

In Figure S3 of the Additional file 1, it is shown that smaller variations generally result in the state transition matrices computed using the SBN technique compared to those obtained using the Monte Carlo (MC) method.

In this study, we have shown that structure-based matrices computed using the expanded set of protein structures now available can detect a greater number of homologs in the popular homology detection programs BLAST and PSI-BLAST, when compared to BLOSUM62.

The distance matrix, computed using (10), reflects the degree to which pairs of sequences are considered similar.

For the proposed JD LU + and JD QR + algorithms, the given realization of {x[f] } is compressed by means of a matrix computed using the method proposed in [53], leading to a three-dimensional vector { x ̄ [ f ] }.

With (Sigma _{t}^{left (mu _{theta _{t}}right)}), we describe the covariance matrix computed using the parameter estimates (mu _{theta _{t}}) as in Eq. (29), while with (Sigma _{t}^{(m)}), we refer to the covariance matrix evaluated per drawn parameter sample (theta _{t+1}^{(m)}).

For each panel, an unweighted neighbor-joining (NJ) tree based on a dissimilarity matrix computed using a shared allele index was built using DARwin software (Perrier and Jaquemout-Collet 2006) and the sub-population attributions of the accessions were projected as colors on the tree (Additional file 4: Figure S1 and Additional file 5: Figure S2).

The GBLUP method uses a genomic relationship matrix computed using imputed or nonimputed marker information.

A relationship matrix computed using pedigree information was used in this analysis.

The state transition matrix computed using an SBN can be used to obtain the steady state distribution of a network.