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The operational taxonomic units (OTUs) were created by aligning unique sequences and calculating distance matrices as previously described [23] and using DOTUR [27] to create clusters at the 3% level.
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Since both algorithms rely on finding the largest cliques in the graph induced by the state matrix, which as previously explained is known to be NP-complete in general, we have used the MATLAB function [40], which allows bounding the maximal clique size, hence bound the complexity according to Lemma 2. As baseline for comparison we used the traditional uncoded case.
Clones expressing FLNa, FLNaΔ3, or vector control (FLNa-) were examined in matrix assembly assays as previously described [15], [28].
For this exposition, assume that the coded symbols c are transmitted through a channel Q=H J, where H is the channel matrix and J is the interleaver matrix as previously defined.
In the adult mouse brain, we used an affinity chromatography approach, based on roscovitine immobilized on a solid matrix as previously described [9], [30].
The solubilized skeletal muscle matrix contained 16.7±0.1 µg GAG per mg of matrix, while the cardiac matrix had approximately 20 µg GAG per mg of matrix as previously reported [23].
In the presence of a β1-integrin-blocking antibody, very few T cells were able to cross the filter and the extracellular matrix, as previously demonstrated (9).
A custom R script was used to create a scoring matrix as previously described (Stenberg et al. 2005; Philip et al. 2012).
The nemaline bodies were highly dynamic, rather than being tethered to the Z-disk or extracellular matrix as previously proposed [ 46, 57].
The currently applied fixation techniques illuminate that the interstitial interface between epithelial and mesenchymal stem/progenitor cells contains much more extracellular matrix as previously known.
For each patient, each VAF matrix was converted to a presence/absence matrix as previously described [ 16], where samples were called positive for an SNV's alternative allele if its frequency was 0.02 or greater.
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