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Interestingly, a DNA sequence associated with this pausing, called the pause button, closely matches the sequences that bind to two subunits of TFIID (TAF6 and TAF9; Kadonaga, 2012).
A disadvantage of this strategy is that because it depends on protein sequence matches, the sequences lacking protein matches cannot be clustered.
The absence of a probe that matches the sequences of another parent precludes the estimation of expression of both parental gene variants in the polyploid.
Table 2 shows the best matches the sequences produced when compared to the NCBI non-redundant protein database using BLASTp.
Despite these matches, the sequences are not long enough to discriminate confidently between a TE footprint and chance occurrence of the same sequence.
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The sequence for amphoterin matches the sequence of HMGB1, establishing HMGB1 as a membrane protein on certain cells [ 5, 6].
For further analysis of the protein sequence, GeneReporter submits a query to InterProScan that matches the sequence against InterPro.
A successful mapping if exactly one of the Pfam-A domain models from the catalogue matches the sequence.
A target sequence that perfectly matches the sequence of a probe binds with much greater affinity than one with a mismatch sequence.
They tried unsuccessfully to match the sequences they did isolate to genes from modern stingless bees.
None of the scFv antibodies selected matched the sequences of previously reported anti-α-syn scFv antibodies.
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