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In most cases, peptides were matched to proteins when statistically significant MASCOT probability scores (<0.05) were consistent with the protein experimental pI and Mr and when the manually-derived partial peptide sequences matched the database protein sequence.
The resulting contigs and singletons were assessed for similarity to the protein non-redundant database using BlastX at NCBI [ 98] and sequences annotated if the match complied with the following criteria: e-value < e-10 and > 70% of alignment coverage, or e-40 if only the 3' UTR matched the database.
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The officer will then decide if the visitor's face matches the database image, and if the officer decides it does, the visitor will be questioned further.
If imagery doesn't match the database but is suspected of showing child exploitation, it's manually reviewed.
A distance matching with tolerance of 2 Å was given during pharmacophore mapping of the database along with a minimum of 4 sites to match the database entries.
o Change "Prepared by" on the data collection form to "DR name" to match the database.
In other words, even random, nonsense motifs would match the database at this P-value threshold.
The unigenes that failed to match the database information the predicted protein CDS was determined using estscan software [ 44].
Recall [ 48] is the ratio of the largest number of nodes in training matched the standard database to the number of nodes in the standard database.
Relatively few reads matched the repeat database for Arabidopsis.
In the potato POT and PPT libraries, 24.3 and 20.5% of the nucleotides matched the protein database, respectively.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com