Sentence examples for matched site was from inspiring English sources

In comparison, a control matched site was identified for assessments.

To study the function of ScMT2-1-3 in prokaryothe, the ScMT2-1-3 ORF with matched sites was amplified by PCR from the identified cDNA clone of the full-length cDNA library.

One site is exposed to UVA, and its matching site is not.

If matching sites are not found in the database, Metaprint2D informs the user and makes no predictions rather than extrapolating beyond its domain of applicability.

Sites with 7mer-m8 or 7mer-A1 matches present in all three species within 20 positions of the human seed match site were considered to be conserved.

For both miR-1 and miR-124, mRNAs with a single 8mer seed match site were overrepresented in the Ago2 IPs relative to those with single 7mer seed match sites, and those with single 7mer seed match sites were overrepresented relative those with single 6mer seed match sites (Figure S2A and B).

Enrichment of mRNAs containing coding sequence and 5'-UTR seed match sites was not observed in the Karginov et al. study.

The efficacy of coding seed match sites was tested for two mRNAs lacking seed matches in their 3'-UTR by cloning the coding sequences in-frame with a luciferase reporter; mutation of these seed match sites led to a ∼25% increase in the expression of luciferase.

Likewise, mRNAs with two or more 7mer seed match sites were overrepresented in the Ago2 IPs relative to those with one (Figure S2C and D).

Bartel and co-workers [50] previously reported that mRNAs with long seed match sites (e.g. 8mer matches) were more likely to change in abundance in response miRNA transfection than those with shorter seed match sites, and that mRNAs with two 7mer seed match sites were more likely to show changes than those with one.

We found that the score worked well during training when comparing matching quality across different proteins against the same query: (2) where Nassign is the number of matched sites, and m is the query protein length and n is the target protein length.