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After codon-optimization and certain safety mutations, matched sequences from the env, gag, pol, nef, and tat genes were inserted into both a naked DNA plasmid backbone (ADVAX) and a modified vaccinia ankara (MVA) viral vector (ADMVA), as described by Y. Huang et al. and Z. Chen et al., respectively [5], [6].
Within this order various taxa matched sequences from the datasets.
Fewer than 14% of the African-American mtDNA sequences matched sequences from only West Africa or only West Central Africa.
While 30% of the unigenes were unknown or hypothetical proteins, almost all of them (95%) matched sequences from other species.
In this study, a low number of tobacco sequences matched sequences from other plant species, consistent with our analyses.
For instance, with an E value < 1 × 10-5, 18,976 Onthophagus sequences matched sequences from 12,464 HomoloGene groups (Table 3).
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None of the probes matched sequence from the unmapped reference sequence provided in chrUr.
Sequences of Pseudomonas aeruginosa PAO1-UW genes involved either directly or indirectly in biofilm formation were analyzed using BLASTn to obtain matching sequences from different strain, species and genus.
Probes that perfectly match sequences from XL and XB have a wide range of XB/XL gDNA ratios (Fig. 2A).
To examine if impaired binding of Sp1 and Sp3 to these sites impacted transcriptional regulation, we next prepared luciferase reporters matching sequences from −200 to +87 from Pongo, Hylobates moloch, and Nomascus l. leucogenys.
A BLAST analysis (blastx, e-value<1e-10) of the unique set was conducted against the Transport Classification Database (TCDB) (http://www.tcdb.org/) and the genes matching sequences from that database were again manually reviewed and assigned to a category from the Transport Classification System [57].
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