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Gene expression data were used alone or in combination with matched protein expression data.
Finally, the distinct effects of matched protein expression data in the two groups led us to investigate the role of ubiquitination in the onset of oncogenic properties.
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Of these 75 cases, 34 had matching CNV data available (11 BRCA1, nine BRCA2, and 14 BRCAX), and 18 had matching protein-expression data as assessed by immunohistochemistry (seven BRCA1, eight BRCA2, three BRCAX).
For 18 tumors, RAD21 gene expression was matched with protein expression, as assessed by immunohistochemistry.
qRT PCR analysis data were matched to protein expression levels studied by immunohistochemistry scores.
qRT PCR analysis data were matched to protein expression levels studied by Western blot analysis and immunohistochemistry.
Commercial software packages match protein features and calculate differential expression from the scanned gel images.
On top of the physico-chemical scale information, the Boxplotter matches protein IDs with protein abundance databases [ 13 ] to provide information on the distribution of expression values.
We confirm that the expression patterns observed for the merozoite samples matched data on protein expression for enteric stage parasites [ 20].
In total, we obtained matched mRNA and protein expression data for ESR1/ER and PGR/PR for 1,752 patients in the GEM dataset.
Real-time quantitative RT PCR analysis data were matched to the protein expression values in the 2-DE analyses, immunofluorescence analyses, and immunohistochemistry analyses.
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