Your English writing platform
Discover LudwigSuggestions(5)
Exact(1)
The number of matched loci was 550,202 and the genotype concordance was 97.95% on average.
Similar(59)
Each matched locus was subsequently compared to the Pfam-A database (downloaded March 5, 2013) [ 43] to check that it matched the family PF08173 (YbgT_YccB: Membrane bound YbgT-like protein).
The expected count of matching loci was determined as the average number of matching loci in 20 randomized sequences.
If the probability of false assignment [ 47] based on matching loci was lower than 0.005, then nestlings were designated as within-pair nestlings.
There were multiple joining loci per potential inter-population homoeologous pair and not all size-matching loci were consistent in identifying which homoeologues should be aligned.
The matching locus was identified for each pathogenicity factor in the corresponding genome sequence by comparing a published protein sequence with sets of predicted proteins for each genome using BLASTP.
The corresponding IWGSC loci and gene names for each matching locus are provided in Additional File 1.
Reads that matched multiple loci were removed from the analysis and the resultant alignment files pre-processed to generate 'pile-ups' against each chromosome.
When matching genomic loci were identified, approximately 100,000 bp of genome sequence surrounding the match was imported into Vector NTI and submitted to gene prediction software programs to determine if the hamster sequences were located within exons of predicted genes.
Unless otherwise stated, reads that matched to multiple loci were removed.
A list of probesets matching rice and Brachypodium gene loci was generated using HarvEST http://www.harvest-web.org.
Write better and faster with AI suggestions while staying true to your unique style.
Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com