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Likelihood ratios (LRs) representing paternity indexes with only one parent (motherless of fatherless) were computed either when the match was detected during the inclusion of new DNA profiles, or when searching missing persons within the STR database.
If an alignment of a single-mismatched read is made, a value of 1 is added to each element of the wild-type array in which a sequence match was detected.
In cases where no match was detected, this can be due either to incomplete sequencing, complete absence or to partial degeneration.
A match was detected to the gene GmGIN1 from the fungus Glomus mosseae, which belongs to the Glomeromycota, a sister group of ascomycetes and basidiomycetes and had already been described as having similarity to Hh [ 29].
For the reads that were unalignable to the reference sequences, SOAP iteratively trim several base pairs at the 3'-end and redo the alignment, until a match was detected or the remaining sequence was too short for specific alignment.
Interestingly, a weak match was detected between this region of certain FAM20 family members and a conserved domain within the phosphatidylinositol 3- and 4-kinases [ 13]; however additional experiments must be performed to address the relevance of this similarity.
Similar(54)
If an exact match is detected, an existing data element will be used by designation.
These matches are detected using a clever arrangement of fluorescent tags and optical scanning.
If you and one of your matches are detected to be skiing in Arosa on the same day, both get notified and suggested a place to meet up.
Seven presumed fortuitous matches were detected between pairs of samples during the inclusion of DNA profiles into the STR database (Table 2).
If no matches are detected at these positions, 'galign' generates the reverse complement of the input fragment, and repeats the above algorithm.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com