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These distinct transcripts represent 26,021 non-redundant gene annotations, of which 14,513 (55%) do not match the annotated genomic coordinates found in the original tables, and represent novel annotations resulting from either inclusion of alternative exon sequence or extension of 5' or 3' UTRs.
In rule T-App, the annotated type of the actual argument is required to match the annotated type of the formal argument.
MS/MS data search against six-frame translated genome database identified 10 exonic peptides in 8 genes, which did not match the annotated frame of translation of the corresponding gene.
The 5' ends of the clusters were trimmed to match the annotated 3' UTR, and the boundaries of the clusters were then trimmed to the location of sense piRNAs.
In other cases, a plate did not match the annotated reverse, but a different plate instead, such as the pair-swapping of Library ID 12948 (3f≈4r and 4f≈3r) in Figure 1C and triplication (2f≈2r≈3r) / mis-pairing (3f≈1r) in berry Library ID 13016.
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To improve utility of these data in preparation for ASGARD deposition, the O. fasciatus and P. hawaiensis transcriptomes were further annotated to match the annotation status of the G. bimaculatus transcriptome (V.
Significant antisense tags are those with ≥ 2 copies per tag in RL-SAGE and ≥ 4 copies per tag in MPSS matched to the annotated genes 1 Magnaporthe grisea reference sequences.
We identified 9,286 novel transcripts that completely matched the previously annotated intergenic regions of the genome.
Note that MeSH entry terms (synonyms for the Medical Subject Heading term) are also indexed MeSH tree node Retrieve compounds annotated with the MeSH term that match the query and those annotated with any MeSH terms beneath the node corresponding to that MeSH term.
There have been attempts to quantify overannotation by examining the length distribution of annotated genes, and showing that the length distribution of all annotated genes does not match the length distribution of only annotated genes with supporting homology to known genes [ 8].
The cDNA clone of APIP12 identified in a Y2H screen matched perfectly to the annotated rice gene model LOC_Os01g28690.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com