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** The accession numbers listed in Table 1 reflect the first version of these whole genome shotgun projects as well as the version current at the time of manuscript submission; master accession numbers for these strains are available in the Methods.
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Only the sequences that identified the correct family as verified by the master list accession numbers were chosen as family members.
A p values of < 0.05 was considered significant, lists of identified proteins were made under the criterions, peptide probability >95%, protein probability >99% and 2 minimum unique peptides, and then were merged into a master file where the primary accession numbers and entry names from UniProtKB were used.
A homology search of the rainbow trout Y-specific master sex-determining gene sdY ([ 45] Accession AB626896.1) identified an Atlantic salmon EST (Accession CK897399.1) comprising part of Exon 4 and the 3′UTR sequence of SRY in Atlantic salmon.
Subsequently, no more than 3 best hits from these focused BLAST results were scanned for accession numbers that matched a master list of such numbers.
We processed the mRNA transcript time series data from [ 33] (data accessible at NCBI GEO database [ 17], accession GSE54650) using JTKcycle [ 34] to obtain phases of master list genes.
On the accession of Henry II (1547) he was made master of the king's hunt and great chamberlain.
These analyses identified the HSVd sequence variant already reported in databases with the accession number X06873 [48] as the most abundant (master sequence) in the infecting viroid population (Fig. S1).
PCR was performed using the Go Taq® Green Master Mix Kit (Promega, EUA), with the objective to amplify the cp40 gene (accession number NC_014329.1NCBI).
The accession of Francis II (1559) produced a change of ministers: Montmorency was replaced as grand master of the royal household by Guise, who shared the chief power in the state with his brother Charles, cardinal de Lorraine.
Appointed constable of France on the accession of Francis I, he contributed greatly to the victory at Marignano, which made his young king master of the Milanese.
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