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The mass intensity data were 2log-transformed.
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This approach benefitted from using mass, time and intensity data in aggregate over the entire sample set to reject outliers and noise thereby producing higher quality chemical identities.
An IGE collects intensity data (e.g., mass spectrometry peak intensity provided by MALDI-TOF mass spectrometry or hybridization intensity provided by Affymetrix SNP chips) and then uses a SNP calling algorithm to assign genotype calls to SNPs based on intensity data.
The CCRG method is based on a region-growing method using the pixel intensity data of the tumor region in an iterative statistical manner to detect the edge of the tumor mass.
process mass intensity.
Intensity data from the CEL.
Mass intensity values of the representative masses were normalized by the internal standard and by the weight.
For each fragment, these data comprised mass intensities for the base isotopomer (without any heavy isotopes, M+0), and isotopomers with increasing unit mass (up to M+6) relative to that of M+0.
Relative mass intensities are herein calculated applying a partial least square method and, for optimal resolution of the isotopologue data, iterative refinement is effected.
Relative mass intensities and isotopomer distributions are calculated applying a partial least square method with iterative refinement for high precision data.
After peak picking, the intensity of the strongest peak was used to sort the mass spectral data set in increasing intensity.
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