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Blood and bone marrow sample was collected in heparinized tubes.
After obtaining written informed consent, a bone marrow sample was obtained for analysis of tumor cells, and a 6-mm punch biopsy of skin was obtained for analysis of unaffected somatic cells.
Each marrow sample was washed with PBS.
Cytogenetic analysis of the diagnostic bone marrow sample was performed according to standard methods.
Unfortunately, no pretreatment bone marrow sample was available for LCDD-02.
The primary tumour and remission bone marrow sample was analysed from eight patients.
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Twenty-five random high-power fields from each bone marrow sample were chosen and blindly quantified for histological examination.
The diagnosis of ALL fulfilled the morphological and phenotypic criteria, including that at least 25% of the cells from the bone marrow sample were leukemic blasts.
Smears from each bone marrow sample were prepared using both techniques by the same technician, within maximum of 20 min after aspiration.
DNA from bone marrow samples was genotyped on the Precision Medicine Research Array and biogeographical ancestry was quantitatively assessed using the Geographic Population Structure Origins tool.
Non-amplified RNA from the transduced murine primary bone marrow samples was used for validation with quantitative RT-PCR (qRT-PCR).
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