Sentence examples for markers we calculated from inspiring English sources

For calculation purposes, due to the monomorphic nature of these markers, we calculated each allele size twice in homozygous samples.

Using these new markers, we calculated the difference in pAUC (from specificity = 100% to specificity = 90%).

To estimate the power of the markers, we calculated the total probability of identity' (PID) for each locus and for all loci combined in GENALEX [17].

To examine the diversity of selected markers, we calculated allele frequencies and expected heterozygosities (HE) for the loci of all populations (Table 1, Table S2, and Table S3).

In order to determine sensitivity and specificity of the Exotest based on the detection of the two exosomes protein markers, we calculated the cut-off both CD63 and Cav1-expressing plasma exosomes.

To assess the differentiation power of the SNP markers, we calculated the probability of identity (PID).

To characterize each EST-SSR marker, we calculated three genetic diversity statistics using POPGENE version 1.31 (Yeh et al., 1999): number of alleles per locus, observed heterozygosity, and expected heterozygosity (Table 2).

Here, we used the following criterion to rank the strengths of association from all M=5894 markers: for each marker, we calculated the Bayes factor for the hypothesis S m =1 (see above, Tools of inference) in each of the eight MCMC chains A-H.

For each marker, we calculated five diversity indices for each sampled location and for each phylogenetic lineage using Arlequin v 3.5 [ 92]): the number of haplotypes (h); the number of private haplotypes (i.e. haplotypes found in a single population, hpriv); the number of polymorphic sites (S); gene diversity (H, [ 93]) and nucleotide diversity (π, [ 94]).

The ratio 1 2 1 as predicted by theory held for only 5 of 13 selected markers when we calculated the three marker classes ratio (homozygote by the first allelic variant, homozygote by the second allelic variant, and heterozygote), as estimated by χ criterion.

Finally, for the eight markers described, we calculated the expectation on match probabilities based on the simulated DNA mixture data.