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Exact(5)
Altogether, out of 198 markers localized on GGA2 through RH mapping, only one, labelled "no hit" in figure 1, could not be found by BLAST in the chicken genome sequence; 10 were assigned to existing genomic sequence of unknown location; 2 were assigned to a wrong chromosome and 4 were not localized at the same position when both maps were compared.
EMBRA markers localized on all these maps were used as anchors to define the number correspondence between linkage groups.
Proportions of DArT markers localized on individual chromosomes were not uniform and varied from 9.4% for the chromosome 1R (175 DArT markers) to 18.0% for the chromosome 6R (337 DArT markers).
The pattern of long-distance (genetic) LD was examined for the first time in this species, over the 12 chromosomes, on the basis of SNP markers localized on the composite linkage map and their genotypic profiles in an unstructured population.
In the lower part of the chromosome, several markers localized on the RH map are absent from the GGA2 sequence assembly: the HEY gene at position 2330 cR is localized on GGA26 in the assembly, whereas the two-point LOD scores with its neighbours on the GGA2 RH map are trust-worthy (11.5 with IMPA1, 8.8 with PKIA).
Similar(55)
New markers were localized on the L. angustifolius genetic map [ 17] pursuant to scoring data obtained from the mapping population.
In all, 116 and 110 framework markers were localized on the E. urophylla and E. grandis maps covering 1,383 and 1,216 cM, respectively (additional file 2 - Table S2).
18 out of 25 markers are localized on chromosome BTA15 within the space of 2 Mb, which suggests this region may play an important role in the ethology of the posthitis.
We completed the 2140 markers map with 46 markers localized in area of low markers density.
Due to their higher polymorphism, markers localized in UTR are more interesting than markers in TR.
Five C6AIR markers localize close to Xa7 and one SNP is within the Xa7 region.
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