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Microsatellite markers' data for 2,323 unique cultivars collected and maintained at the French grapevine collection of Vassal (INRA, France), were available [ 8].
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In relationship testing the aim is to determine the most probable pedigree structure given genetic marker data for a set of persons.
We estimate missing genotypes probabilistically using the Lander-Green or Elston-Stewart algorithms and combine high-resolution SNP genotypes for a subset of individuals in each pedigree with sparser marker data for the remaining individuals.
Prior to further analysis, we examined the autosomal marker data for population substructure, since the households were enrolled in two different time periods with slightly different ascertainment criteria.
In addition to the possible architectural causes, less frequent GSMA-GWAS overlap in schizophrenia may also result from the missing marker data for many of our included GWLS, ethnic differences between samples, or low power of the schizophrenia GWAS to date.
Generate marker data for children, given the marker IBD status and parental genotypes at the markers.
Nuclear microsatellite marker data for C. soldanella also suggested isolation of inland populations from coastal ones.
We then generate marker data for the children, given the marker IBD status and parental genotypes at the markers.
GGR, CP, NG, SV, SOM and MVG provided new marker data for mapping saturation and anchoring points for map integration.
These studies relied mainly on SSR marker data for the preparation of genetic maps and locating QTL on chromosomes.
Data sets were simulated with and without missing marker data for flanking markers with 2, 4, 6, 8 or 12 alleles.
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